Nucleic Acids Res D— Given the atypical genetics and dimer composition of the TM assembly, it is somewhat remarkable that it contains the same motifs that define the regulation paradigm of this family of RCK domain containing channels. We also count the number of unique sequences on which each domain is found, which is shown in green. In such cases we mark the omitted level with, for example, "No order", in both the tooltip and the lineage summary. Please disable pop-up blockers. Previous protein expression experiments and phylogentic analysis conducted in our lab have shown that the TM locus of T. Expression of the TM locus resulted in two distinct, but structurally homologous, proteins designated TMA
TrkA-N domain Provide feedback Escherichia coli K(+)-uptake protein TrkA and sequence similarity between TrkA and domains of a family of dehydrogenases.
Similar proteins TrkAN domain protein (D8JBG5) < InterPro < EMBLEBI
TrkA-N domain protein. Gene.
Video: Trka n domain proteins DNA Binding motifs overview
Crystal Structure of a TwoSubunit TrkA Octameric Gating Ring Assembly
uncultured organism. Status. Unreviewed-Annotation score: Protein predictedi. Status. Unreviewed-Annotation score: Protein predictedi TrkA-N domain proteinImported.
Domaini, –RCK C-terminalInterPro annotation.
The high resolution crystal structures of the components of the assembly, TMA and TMB, were also determined independently to 1. There are 4 interactions for this family. Download View. Annu Rev Physiol — Schultz, S. Bacteriol Rev —
We'll be releasing a redesigned version of the InterPro website later this year. Take an early look by clicking below. TrkG: Trk-type K+ transport system, membrane component [Inorganic ion transport TrkA_N: TrkA-N domain This domain is found in a wide variety of proteins.
The TrkA-N domain occurs in a wide variety of transport and non-transport proteins such as channels, carriers, exonucleases, dehydrogenases and.
Otwinowski Z, Minor W Processing of x-ray diffraction data collected in oscillation mode.
Video: Trka n domain proteins Receptor Tyrosine Kinase - RTK Signalling
These sources can be accessed via the tabs below. Since we reduce the species tree to only the eight main taxonomic levels, sequences that are mapped to the sub-species level in the tree would not normally be shown.
Similar proteins TrkA Nterminal domain protein (C3QK28) < InterPro < EMBLEBI
It is also possible that these interactions function in stabilizing the complex in this thermophilic organism. Bottom: molecular surface of the TrkA assembly showing the corresponding domains. These occur when there are large numbers of arcs to be drawn in a small space.
Expression was performed in E.
Since we cannot determine the lineage for these unmapped species, we show all levels between the superkingdom and the species as "uncategorised". TMB C-terminal domain was crystallized using the nanodroplet vapor diffusion method with standard JCSG crystallization protocols [ 2729 ]. You may find that large alignments cause problems for the viewers and the reformatting tool, so we also provide all alignments in Stockholm format.
Comments or questions on the site? It is also possible that these interactions function in stabilizing the complex in this thermophilic organism.
Pfam Family TrkA_N (PF)
If you pause over an arc, a tooltip will be shown, giving the name of the taxonomic level in the title and a summary of the number of sequences and species below that node in the tree.
Trka n domain proteins
|Below is a listing of the unique domain organisations or architectures in which this domain is found.
Fig 1. Browse Subject Areas? Moroni A, Thiel G Flip-flopping salt bridges gate an ion channel. Download View.